FraseR: Find RAre Splicing Events in RNA-Seq Data

assays,FraserDataSet-method

R Documentation

Returns the assay for the given name/index of the FraserDataSet

Description

Returns the assay for the given name/index of the FraserDataSet

Usage

## S4 method for signature 'FraserDataSet'
assays(x, withDimnames = TRUE, ...)

## S4 replacement method for signature 'FraserDataSet,SimpleList'
assays(x, withDimnames = TRUE, HDF5 = TRUE, type = NULL, ...) <- value

## S4 replacement method for signature 'FraserDataSet,list'
assays(x, withDimnames = TRUE, HDF5 = TRUE, type = NULL, ...) <- value

## S4 replacement method for signature 'FraserDataSet,DelayedMatrix'
assays(x, withDimnames = TRUE, HDF5 = TRUE, type = NULL, ...) <- value

Arguments

`x`	FraserDataSet
`withDimnames`	Passed on to SummarizedExperiment::assays()
`...`	Parameters passed on to SummarizedExperiment::assays()
`HDF5`	Logical value indicating whether the assay should be stored as a HDF5 file.
`type`	The psi type.
`value`	The new value to which the assay should be set.