sc3min_plot_cluster_stability: Plot stability of the clusters
In brickyyyy/MinimizedSC3: Minimized Single-Cell Consensus Clustering
Description
Stability index shows how stable each cluster is accross the selected
range of ks. The stability index varies between 0 and 1, where 1 means that
the same cluster appears in every solution for different k.
Usage
1
2
3
4
sc3min_plot_cluster_stability.SingleCellExperiment(object, k)
## S4 method for signature 'SingleCellExperiment'
sc3min_plot_cluster_stability(object, k)
Arguments
object
an object of 'SingleCellExperiment' class
k
number of clusters
brickyyyy/MinimizedSC3 documentation built on May 23, 2019, 1:45 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description
Stability index shows how stable each cluster is accross the selected range of ks. The stability index varies between 0 and 1, where 1 means that the same cluster appears in every solution for different k.
Usage
1 2 3 4 | sc3min_plot_cluster_stability.SingleCellExperiment(object, k)
## S4 method for signature 'SingleCellExperiment'
sc3min_plot_cluster_stability(object, k)
|
Arguments
object |
an object of 'SingleCellExperiment' class |
k |
number of clusters |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.