tests/testthat/test_loadBreastEsets.R

In bhklab/MetaGxBreast: Transcriptomic Breast Cancer Datasets

library(MetaGxBreast)

context("Checking loadBreastEsets")


test_that("ensure datasets and duplicates are properly loaded from the hub and package", {
  esetsAndDuplicates <- MetaGxBreast::loadBreastEsets(loadString = c("CAL", "DFHCC", "DFHCC2", "DFHCC3", "DUKE", "DUKE2", "EMC2"))
  esets <- esetsAndDuplicates$esets
  expect_equal(class(esets[[1]])[1], "ExpressionSet")
  expect_equal(class(esets[[1]]@assayData$exprs), "matrix")

})