calculateNbDiffCase: Calculate the number of differentially methylated cases.
In belleau/methInheritSim: Simulating Whole-Genome Inherited Bisulphite Sequencing Data
Description
Usage
Arguments
Value
Author(s)
Examples
View source: R/methylInheritanceSimInternalMethods.R
Description
Identify the number of differentially methylated cases.
Usage
1
calculateNbDiffCase(nbCase, propDiff, propDiffSd)
Arguments
nbCase
a positive integer, the number of cases.
propDiff
a double superior to 0 and inferior or equal
to 1, the mean value for the proportion of samples that will have,
for a specific position, differentially methylated values. It can be
interpreted as the penetrance.
propDiffSd
a non-negative double, the standard deviation
associated to the propDiff
Value
a integer, the number of differentially methylated cases.
Author(s)
Pascal Belleau, Astrid Deschenes
Examples
1
2
3
4
5
6
## Fix seed to have reproducible results
set.seed(3122)
## Obtained the number of differential cases
methInheritSim:::calculateNbDiffCase(nbCase = 8,
propDiff = 0.8, propDiffSd = 0.2)
belleau/methInheritSim documentation built on April 1, 2020, 2:43 p.m.
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Description Usage Arguments Value Author(s) Examples
View source: R/methylInheritanceSimInternalMethods.R
Description
Identify the number of differentially methylated cases.
Usage
1 | calculateNbDiffCase(nbCase, propDiff, propDiffSd)
|
Arguments
nbCase |
a positive |
propDiff |
a |
propDiffSd |
a non-negative |
Value
a integer, the number of differentially methylated cases.
Author(s)
Pascal Belleau, Astrid Deschenes
Examples
1 2 3 4 5 6 | ## Fix seed to have reproducible results
set.seed(3122)
## Obtained the number of differential cases
methInheritSim:::calculateNbDiffCase(nbCase = 8,
propDiff = 0.8, propDiffSd = 0.2)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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