addRegionMetadata: Add regions metadata to a cisTopic object

In aertslab/cisTopic: cisTopic: Probabilistic modelling of cis-regulatory topics from single cell epigenomics data

Add regions metadata to a cisTopic object

Description

Add regions metadata to a given cisTopic object

Usage

addRegionMetadata(object, region.data, ...)

Arguments

object	cisTopic object
region.data	Additional metadata to add to the cisTopic object. It should be a data frame were the rows are regions and the columns data fields. All regions included in the cisTopic object must be included in this dataframe (additional cells will be ignored), named by their position coordinates.
...	Ignored

Value

Returns a cisTopic object with the new data added in [e-mail].

Examples

cisTopic_mel <- createcisTopicObject(count.matrix = count.matrix)
cisTopic_mel <- addRegionMetadata(cisTopic_mel, region.data = region.data)
cisTopic_mel

aertslab/cisTopic documentation built on April 6, 2024, 9:31 p.m.