clusterSignatures: Clusters signatures according to the rank sum
In YosefLab/FastProjectR: Functional interpretation of single cell RNA-seq latent manifolds
View source: R/methods-Signature.R
clusterSignatures R Documentation
Clusters signatures according to the rank sum
Description
Clusters signatures according to the rank sum
Usage
clusterSignatures(sigMatrix, metaData, autocorrelation, clusterMeta)
Arguments
sigMatrix
matrix of signatures scores, NUM_SAMPLES x NUM_SIGNATURES
metaData
data.frame of meta-data for cells
autocorrelation
data.frame autocorrelation results
clusterMeta
bool whether or not to cluster meta-data (used when pool=TRUE)
Value
a list:
Computed: a list of clusters of computed signatures
Meta: a list of clusters of meta data signatures
YosefLab/FastProjectR documentation built on June 13, 2024, 4:20 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
View source: R/methods-Signature.R
| clusterSignatures | R Documentation |
Clusters signatures according to the rank sum
Description
Clusters signatures according to the rank sum
Usage
clusterSignatures(sigMatrix, metaData, autocorrelation, clusterMeta)
Arguments
sigMatrix |
matrix of signatures scores, NUM_SAMPLES x NUM_SIGNATURES |
metaData |
data.frame of meta-data for cells |
autocorrelation |
data.frame autocorrelation results |
clusterMeta |
bool whether or not to cluster meta-data (used when pool=TRUE) |
Value
a list:
Computed: a list of clusters of computed signatures
Meta: a list of clusters of meta data signatures
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.