Find drugs that target genes based on LINCS L1000 data.
Requires a running redis database with at least 30GB of RAM, as well as the level 3 phase I data from LINCS.
devtools::install_github("vanandelinstitute/relinc")
library(relinc)
rl <- Relincr()
See worked example here.
NOTE: Supporting files are in the ./docs
directory of this repo.
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