inst/examples/examples_ScpModel-DataCorrection.R
In UCLouvain-CBIO/scp: Mass Spectrometry-Based Single-Cell Proteomics Data Analysis
data("leduc_minimal")
scpModelFormula(leduc_minimal)
reconstructed <- scpKeepEffect(leduc_minimal, effects = "SampleType")
batchCorreced <- scpRemoveBatchEffect(
leduc_minimal, effects = c("Channel", "Set", "MedianIntensity")
)
## The two approaches are identical
identical(reconstructed, batchCorreced)
UCLouvain-CBIO/scp documentation built on Oct. 12, 2024, 2:37 a.m.
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data("leduc_minimal")
scpModelFormula(leduc_minimal)
reconstructed <- scpKeepEffect(leduc_minimal, effects = "SampleType")
batchCorreced <- scpRemoveBatchEffect(
leduc_minimal, effects = c("Channel", "Set", "MedianIntensity")
)
## The two approaches are identical
identical(reconstructed, batchCorreced)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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