lrr_trio_plot: Plot markers raw data in a CNV region for a trio
In SinomeM/CNVgears: A Framework to Combine, Analize and Interpret CNVs Calling Results
Description
Usage
Arguments
Value
View source: R/lrr_trio_plot.R
Description
Plot markers raw data in a CNV region for a trio
Usage
1
lrr_trio_plot(cnv, raw_path, sample_list, results)
Arguments
cnv,
a data.table containig one single line of CNVs calling
results.
raw_path,
character, the path where raw data processed by
read_NGS_raw or read_finalreport_raw.
sample_list,
minimal cohort metadata, a data.table produced by the
function read_metadt.
results,
a data.table, the output of
read_results.
This function plot the raw data in the regions of interest in order to visually
confirm the presence of a good de novo CNV candidate.
Value
a list containing the ggplot2 object.
SinomeM/CNVgears documentation built on Nov. 21, 2021, 5:34 a.m.
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Description Usage Arguments Value
View source: R/lrr_trio_plot.R
Description
Plot markers raw data in a CNV region for a trio
Usage
1 | lrr_trio_plot(cnv, raw_path, sample_list, results)
|
Arguments
cnv, |
a |
raw_path, |
|
sample_list, |
minimal cohort metadata, a |
results, |
a This function plot the raw data in the regions of interest in order to visually confirm the presence of a good de novo CNV candidate. |
Value
a list containing the ggplot2 object.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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