GOCluster: GOCluster

In ShadowFiendSF/GSminer: Select gold standard including positive and negative genes pairs based on the Gene Ontology

Description

Clustering by apcluster to get the optimal cluster number and get the final go terms

Usage

GOCluster(sim, selectedGO, seed)

Arguments

sim	similarity matrix
selectedGO	list which name is selected GO term
seed	for reproducibility,

Value

final Selected GO terms

Author(s)

Li Zhaohong && Wu Zefeng

Examples

## Not run: 
library(apcluster)
GOCluster(sim, selectedGO, seed = 100)

## End(Not run)

ShadowFiendSF/GSminer documentation built on May 29, 2019, 3:03 p.m.