markClusterCol: markClusterCol
In RachelQueen1/Spaniel: Spatial Transcriptomics Analysis
Description
Usage
Arguments
Value
Examples
View source: R/addClusterCols.R
Description
A function to mark the columns containing cluster information in the metadata
or colData of a Seurat or SCE object. Columns are marked with "cluster_"
prefix.
Usage
1
markClusterCol(object, pattern)
Arguments
object
Either a Seurat or SCE object containing clustering information
pattern
pattern indicating which columns contain cluster information
Value
A Seurat or SCE object
Examples
1
2
3
sceObj <- readRDS(file.path(system.file(package = "Spaniel"),
"extdata/sceData.rds"))
sceObj <- markClusterCol(sceObj, "res")
RachelQueen1/Spaniel documentation built on May 20, 2021, 5:21 p.m.
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Description Usage Arguments Value Examples
View source: R/addClusterCols.R
Description
A function to mark the columns containing cluster information in the metadata or colData of a Seurat or SCE object. Columns are marked with "cluster_" prefix.
Usage
1 | markClusterCol(object, pattern)
|
Arguments
object |
Either a Seurat or SCE object containing clustering information |
pattern |
pattern indicating which columns contain cluster information |
Value
A Seurat or SCE object
Examples
1 2 3 | sceObj <- readRDS(file.path(system.file(package = "Spaniel"),
"extdata/sceData.rds"))
sceObj <- markClusterCol(sceObj, "res")
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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