permutation_plot: Permutation Best Scores Plot

In RC-88/CaDrA: Candidate Driver Analysis

Permutation Best Scores Plot

Description

Plot the Empirical Null Distribution of Permutation Best Scores returned from CaDrA() function

Usage

permutation_plot(perm_res)

Arguments

perm_res

a list of objects returned from CaDrA() function. The returning object contains a list of key parameters that are used to run the permutation-based testing, a vector of permuted best scores for a given n_perm, an observed best score, and a computed permutation p-value.

Value

a density plot

Examples

# Load pre-computed permutation results
data(perm_res)

# Plot the permutation results
permutation_plot(perm_res)

RC-88/CaDrA documentation built on March 28, 2023, 12:18 a.m.