oncostrip: draw an oncostrip similar to cBioportal oncoprinter output.
In PoisonAlien/maftools: Summarize, Analyze and Visualize MAF Files
oncostrip R Documentation
draw an oncostrip similar to cBioportal oncoprinter output.
Description
draw an oncostrip similar to cBioportal oncoprinter output.
Usage
oncostrip(maf = NULL, ...)
Arguments
maf
an MAF object generated by read.maf
...
arguments passed oncoplot
Details
This is just a wrapper around oncoplot with drawRowBar and drawColBar set to FALSE
Value
None.
See Also
oncoplot
Examples
laml.maf <- system.file("extdata", "tcga_laml.maf.gz", package = "maftools")
laml <- read.maf(maf = laml.maf)
dev.new()
oncostrip(maf = laml, genes = c('NPM1', 'RUNX1'))
PoisonAlien/maftools documentation built on Nov. 5, 2024, 4:12 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
| oncostrip | R Documentation |
draw an oncostrip similar to cBioportal oncoprinter output.
Description
draw an oncostrip similar to cBioportal oncoprinter output.
Usage
oncostrip(maf = NULL, ...)
Arguments
maf |
an |
... |
arguments passed |
Details
This is just a wrapper around oncoplot with drawRowBar and drawColBar set to FALSE
Value
None.
See Also
oncoplot
Examples
laml.maf <- system.file("extdata", "tcga_laml.maf.gz", package = "maftools")
laml <- read.maf(maf = laml.maf)
dev.new()
oncostrip(maf = laml, genes = c('NPM1', 'RUNX1'))
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.