msp2FunctionalLossesMSP: Convert MSP to MSP with functional losses
In PlantDefenseMetabolism/MetabolomicTools: Navigating mass spectral similarity in high-resolution MS/MS metabolomics data
Description
Usage
Arguments
Details
Value
Author(s)
Examples
Description
msp2FunctionalLossesMSP converts a MSP-object
(with fragments) into a MSP-object with neutral losses
Usage
1
Arguments
msp
MSP-object
Details
The function msp2FunctionalLosses can be used when calculating
the similarity based on neutral losses instead of fragments.
Value
msp2FunctionalLossesMSP returns a MSP-object
(with neutral losses)
Author(s)
Thomas Naake, thomasnaake@googlemail.com
Examples
1
2
3
4
data("sd02_deconvoluted", package = "MetCirc")
finalMSP <- convert2MSP(sd02_deconvoluted, split = " _ ",
splitIndMZ = 2, splitIndRT = NULL)
finalMSPNL <- msp2FunctionalLossesMSP(msp = finalMSP)
PlantDefenseMetabolism/MetabolomicTools documentation built on May 8, 2019, 2:53 p.m.
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Description Usage Arguments Details Value Author(s) Examples
Description
msp2FunctionalLossesMSP converts a MSP-object
(with fragments) into a MSP-object with neutral losses
Usage
1 |
Arguments
msp |
|
Details
The function msp2FunctionalLosses can be used when calculating
the similarity based on neutral losses instead of fragments.
Value
msp2FunctionalLossesMSP returns a MSP-object
(with neutral losses)
Author(s)
Thomas Naake, thomasnaake@googlemail.com
Examples
1 2 3 4 | data("sd02_deconvoluted", package = "MetCirc")
finalMSP <- convert2MSP(sd02_deconvoluted, split = " _ ",
splitIndMZ = 2, splitIndRT = NULL)
finalMSPNL <- msp2FunctionalLossesMSP(msp = finalMSP)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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