breakpointGRangesToVCF: Converts the given breakpoint GRanges object to VCF format in...
In PapenfussLab/StructuralVariantAnnotation: Variant annotations for structural variants
Description
Usage
Arguments
Value
View source: R/BreakpointGRanges.R
Description
Converts the given breakpoint GRanges object to VCF format in breakend
notation.
Usage
1
Arguments
gr
breakpoint GRanges object. Can contain both breakpoint and single
breakend SV records.
...
For cbind and rbind a list of VCF objects. For all other methods
... are additional arguments passed to methods. See VCF class in
VariantAnnotation for more details.
Value
A VCF object.
PapenfussLab/StructuralVariantAnnotation documentation built on Dec. 25, 2021, 1:20 a.m.
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Description Usage Arguments Value
View source: R/BreakpointGRanges.R
Description
Converts the given breakpoint GRanges object to VCF format in breakend notation.
Usage
1 |
Arguments
gr |
breakpoint GRanges object. Can contain both breakpoint and single breakend SV records. |
... |
For cbind and rbind a list of VCF objects. For all other methods ... are additional arguments passed to methods. See VCF class in VariantAnnotation for more details. |
Value
A VCF object.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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