barplotTotal: Total number of reads per sample

In PF2-pasteur-fr/SARTools: Statistical Analysis of RNA-Seq Tools

Total number of reads per sample

Description

Bar plot of the total number of reads per sample

Usage

barplotTotal(
  counts,
  group,
  col = c("lightblue", "orange", "MediumVioletRed", "SpringGreen"),
  outfile = TRUE,
  ggplot_theme = theme_gray()
)

Arguments

counts	matrix of counts
group	factor vector of the condition from which each sample belongs
col	colors of the bars (one color per biological condition)
outfile	TRUE to export the figure in a png file
ggplot_theme	ggplot2 theme function (theme_gray() by default)

Value

A file named barplotTotal.png in the figures directory

Author(s)

Marie-Agnes Dillies and Hugo Varet

PF2-pasteur-fr/SARTools documentation built on April 6, 2022, 2:24 a.m.