deepblue_list_experiments: list_experiments

In MPIIComputationalEpigenetics/DeepBlueR: DeepBlueR

Description

List the DeepBlue Experiments that matches the search criteria defined by this command parameters.

Usage

deepblue_list_experiments(genome = NULL, type = NULL,
  epigenetic_mark = NULL, biosource = NULL, sample = NULL,
  technique = NULL, project = NULL,
  user_key = deepblue_options("user_key"))

Arguments

genome	- A string or a vector of string (the target genome)
type	- A string or a vector of string (type of the experiment: peaks or signal)
epigenetic_mark	- A string or a vector of string (name(s) of selected epigenetic mark(s))
biosource	- A string or a vector of string (name(s) of selected biosource(s))
sample	- A string or a vector of string (id(s) of selected sample(s))
technique	- A string or a vector of string (name(s) of selected technique(s))
project	- A string or a vector of string (name(s) of selected projects)
user_key	- A string (users token key)

Value

experiments - A array (experiment names and IDS)

See Also

Other Inserting and listing experiments: deepblue_collection_experiments_count, deepblue_faceting_experiments, deepblue_list_recent_experiments, deepblue_list_similar_experiments, deepblue_preview_experiment

Examples

deepblue_list_experiments(genome = "hg19", type = "peaks",
  epigenetic_mark = "H3K27ac", biosource = "blood")

MPIIComputationalEpigenetics/DeepBlueR documentation built on Aug. 11, 2021, 4:12 p.m.