deepblue_get_request_data: get_request_data

In MPIIComputationalEpigenetics/DeepBlue-R: DeepBlueR

Description

Download the requested data. The output can be (i) a string (get_regions, score_matrix, and count_regions), or (ii) a list of ID and names (get_experiments_by_query), or (iii) a struct (coverage).

Usage

deepblue_get_request_data(request_id = NULL,
  user_key = deepblue_options("user_key"))

Arguments

request_id	- A string (ID of the request)
user_key	- A string (users token key)

Value

data - A string or a vector of string (the request data)

See Also

Other Requests status information and results: deepblue_list_requests

Examples

data_id = deepblue_select_experiments(
    experiment_name="E002-H3K9ac.narrowPeak.bed",
    chromosome="chr1")
request_id = deepblue_get_regions(
    query_id =data_id,
    output_format = "CHROMOSOME,START,END")
deepblue_get_request_data(request_id = request_id)

MPIIComputationalEpigenetics/DeepBlue-R documentation built on Aug. 11, 2021, 3:18 p.m.