plot_profile: Plots DNase or ATAC profiles
In HarteminkLab/TOP: Predict transcription factor occupancy using DNase- or ATAC-seq data
plot_profile R Documentation
Plots DNase or ATAC profiles
Description
Plots DNase or ATAC profiles
Usage
plot_profile(cuts, mlen = ncol(cuts)/2 - 200, title = "")
Arguments
cuts
Matrix of DNase or ATAC cuts
mlen
Motif length
title
Title of the plot
Examples
## Not run:
plot_profile(cuts, title='Footprint profiles around binding sites')
## End(Not run)
HarteminkLab/TOP documentation built on July 27, 2023, 6:14 p.m.
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| plot_profile | R Documentation |
Plots DNase or ATAC profiles
Description
Plots DNase or ATAC profiles
Usage
plot_profile(cuts, mlen = ncol(cuts)/2 - 200, title = "")
Arguments
cuts |
Matrix of DNase or ATAC cuts |
mlen |
Motif length |
title |
Title of the plot |
Examples
## Not run:
plot_profile(cuts, title='Footprint profiles around binding sites')
## End(Not run)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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