transformAlnsToLong: Transform data for plotting
In HLindsay/CrispRVariants: Tools for counting and visualising mutations in a target location
Description
Usage
Arguments
Value
Author(s)
View source: R/plotAlignments.R
Description
Orders and transforms a reference sequence and a set of aligned sequences
into long format, i.e. one observation (tile position) per row. Used internally by
plotAlignments.
Usage
1
transformAlnsToLong(ref, alns, add.other = FALSE)
Arguments
ref
The reference sequence
alns
Character vector of aligned sequences
add.other
Add a blank row labelled "Other" (Default: FALSE)
Value
A matrix of characters and plotting locations
Author(s)
Helen Lindsay
HLindsay/CrispRVariants documentation built on May 28, 2019, 12:40 p.m.
R Package Documentation
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Description Usage Arguments Value Author(s)
View source: R/plotAlignments.R
Description
Orders and transforms a reference sequence and a set of aligned sequences
into long format, i.e. one observation (tile position) per row. Used internally by
plotAlignments.
Usage
1 | transformAlnsToLong(ref, alns, add.other = FALSE)
|
Arguments
ref |
The reference sequence |
alns |
Character vector of aligned sequences |
add.other |
Add a blank row labelled "Other" (Default: FALSE) |
Value
A matrix of characters and plotting locations
Author(s)
Helen Lindsay
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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