make_peak_dt: make_peak_dt
In FrietzeLabUVM/ssvQC: QC for enrichment based NGS
View source: R/functions_make.R
make_peak_dt R Documentation
make_peak_dt
Description
make_peak_dt
Usage
make_peak_dt(peak_grs, treatments = NULL)
Arguments
peak_grs
list of GRanges for peak sets
treatments
opional character vector of treatments for each peak set.
Value
a data.table with peak_count data for each GRanges in peak_grs.
Examples
peak_files = dir(system.file("extdata", package = "seqqc"),
pattern = "Peak$", full.names = TRUE)
peak_grs = seqsetvis::easyLoad_narrowPeak(peak_files)
make_peak_dt(peak_grs)
FrietzeLabUVM/ssvQC documentation built on March 25, 2024, 12:24 a.m.
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View source: R/functions_make.R
| make_peak_dt | R Documentation |
make_peak_dt
Description
make_peak_dt
Usage
make_peak_dt(peak_grs, treatments = NULL)
Arguments
peak_grs |
list of GRanges for peak sets |
treatments |
opional character vector of treatments for each peak set. |
Value
a data.table with peak_count data for each GRanges in peak_grs.
Examples
peak_files = dir(system.file("extdata", package = "seqqc"),
pattern = "Peak$", full.names = TRUE)
peak_grs = seqsetvis::easyLoad_narrowPeak(peak_files)
make_peak_dt(peak_grs)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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