plot_common_hit: Plot common hit

In EmanuelSoda/ScreenR: Package to Perform High Throughput Biological Screening

Plot common hit

Description

This method plot the hits in common among the three methods is a wrapper for the ggvenn function.

Usage

plot_common_hit(
  hit_zscore,
  hit_camera,
  hit_roast,
  alpha = 0.5,
  stroke_size = 0.5,
  set_name_size = 4,
  text_color = "black",
  text_size = 4,
  show_percentage = TRUE,
  title = "",
  color = c("#1B9E77", "#D95F02", "#7570B3"),
  show_elements = TRUE
)

Arguments

hit_zscore	The list of hits of the find_zscore_hit
hit_camera	The list of hits of the find_camera_hit
hit_roast	The list of hits of the find_roast_hit
alpha	A value for the opacity of the plot. Allowed values are in the range 0 to 1
stroke_size	Stroke size for drawing circles
set_name_size	Text size for set names
text_color	Text color for intersect contents
text_size	Text size for intersect contents
show_percentage	Show percentage for each set
title	The title to display above the plot
color	The three vector color for the venn
show_elements	Show set elements instead of count/percentage.

Value

A vector containing the common hit

Examples

hit_zscore <- data.frame(Gene = c("A", "B", "C", "D", "E"))
hit_camera <- data.frame(Gene = c("A", "B", "C", "F", "H", "G"))
hit_roast <- data.frame(Gene = c("A", "L", "N"))
plot_common_hit(hit_zscore, hit_camera, hit_roast)

EmanuelSoda/ScreenR documentation built on Sept. 29, 2023, 12:33 a.m.