tgfb_gs_dn: Gene set of down-regulated genes for the TGFb-induced EMT...
In DavisLaboratory/singscore: Rank-based single-sample gene set scoring method
tgfb_gs_dn R Documentation
Gene set of down-regulated genes for the TGFb-induced EMT gene signature
Description
A GeneSet object that contains the down-regulated genes of the TGFb-induced
EMT gene signature that was derived by (Foroutan et al,2017), using two
meta-analysis techniques. The gene signature contains an up-regulated gene
set (up-set) and a down-regulated gene set (down-set). Please refer to the
vignettes for the steps to acquire the exact data object.
Usage
tgfb_gs_dn
Format
A GeneSet object
Source
References
Foroutan, Momeneh, Joseph Cursons, Soroor Hediyeh-Zadeh, Erik W
Thompson, and Melissa J Davis. 2017. “A Transcriptional Program for
Detecting Tgfbeta-Induced Emt in Cancer.” Molecular Cancer Research.
American Association for Cancer Research.
doi:10.1158/1541-7786.MCR-16-0313.
See Also
"GeneSet",tgfb_gs_up
DavisLaboratory/singscore documentation built on July 5, 2023, 9:58 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
| tgfb_gs_dn | R Documentation |
Gene set of down-regulated genes for the TGFb-induced EMT gene signature
Description
A GeneSet object that contains the down-regulated genes of the TGFb-induced EMT gene signature that was derived by (Foroutan et al,2017), using two meta-analysis techniques. The gene signature contains an up-regulated gene set (up-set) and a down-regulated gene set (down-set). Please refer to the vignettes for the steps to acquire the exact data object.
Usage
tgfb_gs_dn
Format
A GeneSet object
Source
References
Foroutan, Momeneh, Joseph Cursons, Soroor Hediyeh-Zadeh, Erik W Thompson, and Melissa J Davis. 2017. “A Transcriptional Program for Detecting Tgfbeta-Induced Emt in Cancer.” Molecular Cancer Research. American Association for Cancer Research. doi:10.1158/1541-7786.MCR-16-0313.
See Also
"GeneSet",tgfb_gs_up
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.