fold_spec_chart: fold specificity rectangle plot

In DanWiebe/fsgor: Package for Fold-specific GO Terms Recognition

Description

Create rectangle plot for fold specificity data representation

Usage

fold_spec_chart(fs_res_up, fs_res_down, scope = NULL, interval_labels,
  x_text_size = 10)

Arguments

fs_res_up	dataframe with fold-specific GO terms data (recognize_fs_terms() function output) for up regulated genes
fs_res_down	dataframe with fold-specific GO terms data (recognize_fs_terms() function output) for down regulated genes
scope	GO term namespace ("biological_process", "molecular_function", "cellular_component")
interval_labels	vector of user defined names for non-overlaping intervals (e.g. c("weak response",...,"strong response")), see fsgor::six_perc_labs for example
x_text_size	size of text for x axis labels

Value

fold specificity rectangle plot as ggplot object

Examples

    data(fs_res_up, fs_res_down, package = "fsgor")
    fold_spec_chart(fs_res_up, fs_res_down, interval_labels = fsgor::six_perc_labs)

DanWiebe/fsgor documentation built on May 12, 2019, 12:30 a.m.