group_transcripts: Group transcripts
In CshlSiepelLab/DENR: Deconvolution of Expression for Nascent RNA Sequencing Data
Description
Usage
Arguments
Value
View source: R/transcript_models_build_helpers.R
Description
Creates groups of transcripts on the same strand based on
proximity. The groups are constructed of connected transcripts
such that a pair of transcripts are considered connected if
they are within a given distance d of each other. The
group then consists of all transcripts that are connected to
at least one other member.
Usage
1
group_transcripts(transcript_granges, distance = 0)
Arguments
transcript_granges
GRanges-class
object
distance
the distance within which two transcripts are
considered connected
Value
A GenomicRangesList-class
object
CshlSiepelLab/DENR documentation built on July 16, 2021, 10:42 p.m.
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Description Usage Arguments Value
View source: R/transcript_models_build_helpers.R
Description
Creates groups of transcripts on the same strand based on proximity. The groups are constructed of connected transcripts such that a pair of transcripts are considered connected if they are within a given distance d of each other. The group then consists of all transcripts that are connected to at least one other member.
Usage
1 | group_transcripts(transcript_granges, distance = 0)
|
Arguments
transcript_granges |
|
distance |
the distance within which two transcripts are considered connected |
Value
A GenomicRangesList-class
object
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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