plotComparisonVenns: If multiple comparisons - Show overlap in Venn diagrams

In ComputationalProteomics/NormalyzerDE: Evaluation of normalization methods and calculation of differential expression analysis statistics

If multiple comparisons - Show overlap in Venn diagrams

Description

If multiple comparisons - Show overlap in Venn diagrams

Usage

plotComparisonVenns(
  nst,
  jobName,
  currentLayout,
  pageno,
  sigThres = 0.1,
  sigThresType = "fdr",
  log2FoldThres = 0,
  maxContrasts = 4
)

Arguments

nst	NormalyzerDE statistics object.
jobName	Name of processing run.
currentLayout	Layout used for document.
pageno	Current page number.
sigThres	Cutoff value for significance theshold
sigThresType	Type of significance cutoff
log2FoldThres	Log2-fold based cutoff threshold
maxContrasts	Maximum contrasts to show pairwise comparisons for

Value

None

ComputationalProteomics/NormalyzerDE documentation built on Oct. 18, 2024, 9:57 p.m.