Global functions | |
---|---|
TSRchitectUsersGuide | Man page Source code |
TSRmshapeIndex | Man page Source code |
TSRshapeIndex | Man page Source code |
addAnnotationToTSR | Man page |
addAnnotationToTSR,tssObject,character,numeric,numeric,numeric,c | Man page |
addTagCountsToTSR | Man page |
addTagCountsToTSR,tssObject,character,numeric,numeric,logical-me | Man page |
bedToTSS | Man page |
bedToTSS,tssObject-method | Man page |
createSummarizedExperiment | Man page |
createSummarizedExperiment,tssObject,character,numeric,character | Man page |
detTSR | Man page |
detTSR,tssObject,character,numeric,numeric,numeric-method | Man page |
determineTSR | Man page |
determineTSR,tssObject,numeric,character,character,numeric,numer | Man page |
getBamDataFirstRead | Man page |
getBamDataFirstRead,tssObject,numeric-method | Man page |
getBamDataLastRead | Man page |
getBamDataLastRead,tssObject,numeric-method | Man page |
getFileNames | Man page |
getFileNames,tssObject-method | Man page |
getTSRdata | Man page |
getTSRdata,tssObject,character,numeric-method | Man page |
getTSScountData | Man page |
getTSScountData,tssObject,character,numeric-method | Man page |
getTSStagData | Man page |
getTSStagData,tssObject,numeric-method | Man page |
getTitle | Man page |
getTitle,tssObject-method | Man page |
gsq2bed | Man page |
gsq2bed,character,character-method | Man page |
importAnnotationExternal | Man page |
importAnnotationExternal,tssObject,character,character-method | Man page |
importAnnotationHub | Man page |
importAnnotationHub,tssObject,character,character,character,char | Man page |
inputToTSS | Man page |
inputToTSS,tssObject-method | Man page |
loadTSSobj | Man page |
loadTSSobj,character,character-method | Man page |
makeGRangesFromTSR | Man page |
makeGRangesFromTSR,tssObject,character,numeric-method | Man page |
mergeSampleData | Man page |
mergeSampleData,tssObject,numeric,numeric-method | Man page |
prcTSS | Man page |
processTSS | Man page |
processTSS,tssObject,numeric,character,logical-method | Man page |
tagCountTSS | Man page Source code |
tsrCluster | Man page Source code |
tssArrayProperties | Man page Source code |
tssObject | Man page Source code |
writeTSR | Man page |
writeTSR,tssObject,character,numeric,character,logical,character | Man page |
writeTSS | Man page |
writeTSS,tssObject,character,numeric,character,logical,character | Man page |
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