kube_run: Run builder on k8s

In Bioconductor/BiocKubeInstall: Build R / Bioconductor package binaries using Kubernetes on a cloud service

Run builder on k8s

Description

Run binary installation on k8s cluster

Usage

kube_run(
  bioc_version,
  image_name,
  volume_mount_path = "/host/",
  exclude_pkgs = character(),
  secret = "/home/key.json"
)

Arguments

bioc_version	character(), bioconductor bioc_version number, e.g 3.12 or 3.13
image_name	character(), name of the image for which binaries are being built
volume_mount_path	character(), path to volume mount
exclude_pkgs	character(), list of packages to exclude
secret	character(1) path to the location of the secret key for the service account.

Examples

## Not run: 

kube_run(bioc_version = '3.20',
         image_name = 'bioconductor_docker',
         volume_mount_path = '/host/',
         exclude_pkgs = c('canceR'))

## End(Not run)

Bioconductor/BiocKubeInstall documentation built on April 12, 2025, 9:36 a.m.