projectOnNetwork: Project the gene expression matrix onto a lower space of the...

In BIMSBbioinfo/netSmooth: Network smoothing for scRNAseq

Description

Project the gene expression matrix onto a lower space of the genes defined in the smoothing network

Usage

## S4 method for signature 'matrix'
projectOnNetwork(gene_expression, new_features, missing.value = 0)

Arguments

gene_expression	gene expression matrix
new_features	the genes in the network, on which to project the gene expression matrix
missing.value	value to assign to genes that are in network, but missing from gene expression matrix

Value

the gene expression matrix projected onto the gene space defined by new_features

BIMSBbioinfo/netSmooth documentation built on Dec. 24, 2019, 8:08 p.m.