BIMSBbioinfo/netSmooth: Network smoothing for scRNAseq
netSmooth is an R package for network smoothing of single cell RNA sequencing data. Using bio networks such as protein-protein interactions as priors for gene co-expression, netsmooth improves cell type identification from noisy, sparse scRNAseq data.
Getting started
Browse package contents
Package details |
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| Bioconductor views | Clustering DimensionReduction GeneExpression GraphAndNetwork Network Normalization Preprocessing RNASeq Sequencing SingleCell Transcriptomics |
| Maintainer | |
| License | GPL-3 |
| Version | 1.7.0 |
| URL | https://github.com/BIMSBbioinfo/netSmooth |
| Package repository | View on GitHub |
| Installation |
Install the latest version of this package by entering the following in R:
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