tx_unifyTxDTL: Unify lists of txDTs

In AngelCampos/tx_tools: An R package facilitating analysis of RNA modifications, structures, and interactions

Unify lists of txDTs

Description

Unify lists of txDTs

Usage

tx_unifyTxDTL(
  txDTL,
  geneAnnot = NULL,
  genome = NULL,
  type = "intersection",
  nCores = 1
)

Arguments

txDTL	list. A list of txDTs
geneAnnot	GRanges. Gene annotation as loaded by tx_load_bed().
genome	list. The full reference genome sequences, as loaded by tx_load_genome() or prepackaged by BSgenome, see ?BSgenome::available.genomes
type	character. Set function to apply to genes in the list of txDTs, either 'union' or 'intersection'.
nCores	integer. Number of cores to run the function with. Multicore capability not available in Windows OS.

Value

list

AngelCampos/tx_tools documentation built on Sept. 17, 2024, 1:27 a.m.