package: Full genome sequences for Drosophila melanogaster (flybase...

In 4DGenome/BSgenome.Dmelanogaster.flybase.dm3: Full genome sequences for Drosophila melanogaster (flybase version dm3)

Description

Full genome sequences for Drosophila melanogaster (Fly) as provided by flybase (dm3, Apr. 2006) and stored in Biostrings objects.

Note

This BSgenome data package was made from the following source data files:

-- information not available --
  

See ?BSgenomeForge and the BSgenomeForge vignette (vignette("BSgenomeForge")) in the BSgenome software package for how to make a BSgenome data package.

Author(s)

The Bioconductor Dev Team

See Also

• BSgenome objects and the available.genomes function in the BSgenome software package.

• DNAString objects in the Biostrings package.

• The BSgenomeForge vignette (vignette("BSgenomeForge")) in the BSgenome software package for how to make a BSgenome data package.

Examples

BSgenome.Dmelanogaster.flybase.dm3
genome <- BSgenome.Dmelanogaster.flybase.dm3
head(seqlengths(genome))
genome$U

## ---------------------------------------------------------------------
## Genome-wide motif searching
## ---------------------------------------------------------------------
## See the GenomeSearching vignette in the BSgenome software
## package for some examples of genome-wide motif searching using
## Biostrings and the BSgenome data packages:
if (interactive())
    vignette("GenomeSearching", package="BSgenome")

4DGenome/BSgenome.Dmelanogaster.flybase.dm3 documentation built on May 5, 2019, 10:45 a.m.