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inst/tinytest/test_Clanistics.R
In phangorn: Phylogenetic Reconstruction and Analysis
tree <- rtree(10)
x <- simSeq(tree, l = 5, type="USER", levels = c("red", "violet", "blue"))
# test that clanistics works properly
expect_true(inherits(getClans(tree), "matrix"))
expect_true(inherits(getClips(tree), "matrix"))
expect_true(inherits(getSlices(tree), "matrix"))
expect_true(inherits(getDiversity(tree, x), "clanistics"))
expect_true(inherits(getDiversity(tree, x), "data.frame"))
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phangorn documentation built on Sept. 17, 2024, 5:08 p.m.
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tree <- rtree(10)
x <- simSeq(tree, l = 5, type="USER", levels = c("red", "violet", "blue"))
# test that clanistics works properly
expect_true(inherits(getClans(tree), "matrix"))
expect_true(inherits(getClips(tree), "matrix"))
expect_true(inherits(getSlices(tree), "matrix"))
expect_true(inherits(getDiversity(tree, x), "clanistics"))
expect_true(inherits(getDiversity(tree, x), "data.frame"))
Try the phangorn package in your browser
Any scripts or data that you put into this service are public.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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