A versatile R visualization package that empowers researchers with comprehensive visualization tools for seamlessly mapping peptides to protein sequences, identifying distinct domains and regions of interest, accentuating mutations, and highlighting post-translational modifications, all while enabling comparisons across diverse experimental conditions. Potential applications of 'PepMapViz' include the visualization of cross-software mass spectrometry results at the peptide level for specific protein and domain details in a linearized format and post-translational modification coverage across different experimental conditions; unraveling insights into disease mechanisms. It also enables visualization of major histocompatibility complex-presented peptides in different antibody regions predicting immunogenicity in antibody drug development.
Package details |
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Author | Zhenru Zhou [aut, cre], Qui Phung [ctb], Corey Bakalarski [aut], Genentech, Inc. [cph] |
Bioconductor views | Immunogenicity MassSpectrometry Peptidomics Proteomics Software Visualization |
Maintainer | Zhenru Zhou <zhou.zhenru@gene.com> |
License | MIT + file LICENSE |
Version | 1.0.0 |
Package repository | View on CRAN |
Installation |
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