get_funguild_db: Retrieve the FUNGuild database
In MiscMetabar: Miscellaneous Functions for Metabarcoding Analysis
get_funguild_db R Documentation
Retrieve the FUNGuild database
Description
The original function and documentation was written by Brendan Furneaux
in the FUNGuildR package.
Please cite this publication (\Sexpr[results=rd]{tools:::Rd_expr_doi("10.1016/j.funeco.2015.06.006")}).
Usage
get_funguild_db(db_url = "http://www.stbates.org/funguild_db_2.php")
Arguments
db_url
a length 1 character string giving the URL to retrieve the database
from
Value
a tibble::tibble containing the database, which can be passed
to the db argument of funguild_assign()
Author(s)
Brendan Furneaux (orcid: 0000-0003-3522-7363),
modified by Adrien Taudière
References
Nguyen NH, Song Z, Bates ST, Branco S, Tedersoo L, Menke J,
Schilling JS, Kennedy PG. 2016. FUNGuild: An open annotation tool for
parsing fungal community datasets by ecological guild. Fungal Ecology
20:241-248.
MiscMetabar documentation built on Oct. 8, 2024, 1:07 a.m.
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| get_funguild_db | R Documentation |
Retrieve the FUNGuild database
Description
The original function and documentation was written by Brendan Furneaux in the FUNGuildR package.
Please cite this publication (\Sexpr[results=rd]{tools:::Rd_expr_doi("10.1016/j.funeco.2015.06.006")}).
Usage
get_funguild_db(db_url = "http://www.stbates.org/funguild_db_2.php")
Arguments
db_url |
a length 1 character string giving the URL to retrieve the database from |
Value
a tibble::tibble containing the database, which can be passed
to the db argument of funguild_assign()
Author(s)
Brendan Furneaux (orcid: 0000-0003-3522-7363), modified by Adrien Taudière
References
Nguyen NH, Song Z, Bates ST, Branco S, Tedersoo L, Menke J, Schilling JS, Kennedy PG. 2016. FUNGuild: An open annotation tool for parsing fungal community datasets by ecological guild. Fungal Ecology 20:241-248.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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