find_markers_genes: Function to annotate markers and the respective p-values...

In GALLO: Genomic Annotation in Livestock for Positional Candidate LOci

Function to annotate markers and the respective p-values within genes

Description

Function to annotate markers and the respective p-values within genes

Usage

find_markers_genes(db_file, marker_file, int = 0)

Arguments

db_file	A data frame obtained from the import_gff_gtf containing the gtf information
marker_file	A data frame with the results of the association test performed for each marker
int	The interval (in base pairs) used to annotated markers downstream and upstream from the genes coordinates

Value

A data frame containing the markers mapped within the selected interval for each gene in the annotation file

GALLO documentation built on June 22, 2024, 9:17 a.m.