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'treeio' is an R package to make it easier to import and store phylogenetic tree with associated data; and to link external data from different sources to phylogeny. It also supports exporting phylogenetic tree with heterogeneous associated data to a single tree file and can be served as a platform for merging tree with associated data and converting file formats.
Package details |
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Author | Guangchuang Yu [aut, cre] (<https://orcid.org/0000-0002-6485-8781>), Tommy Tsan-Yuk Lam [ctb, ths], Casey Dunn [ctb], Bradley Jones [ctb], Tyler Bradley [ctb], Shuangbin Xu [ctb] (<https://orcid.org/0000-0003-3513-5362>), Konstantinos Geles [ctb] |
Bioconductor views | Alignment Annotation Clustering DataImport DataRepresentation MultipleSequenceAlignment Phylogenetics Software |
Maintainer | Guangchuang Yu <guangchuangyu@gmail.com> |
License | Artistic-2.0 |
Version | 1.14.3 |
URL | https://github.com/YuLab-SMU/treeio (devel) https://docs.ropensci.org/treeio/ (docs) https://yulab-smu.top/treedata-book/ (book) |
Package repository | View on Bioconductor |
Installation |
Install the latest version of this package by entering the following in R:
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