inspectPeptideScores: Inspect peptide scores.
In synapter: Label-free data analysis pipeline for optimal identification and quantitation
Description
Usage
Arguments
Value
Author(s)
View source: R/exported_tools.R
Description
This function takes a final peptide file and
returns information about the unique peptide scores
and their number in each peptide matchType (PepFrag1 and
PepFrag2) by protein dataBaseType (Random and Regular)
category. The function is a lightweight verion of
getPepNumbers and plotPepScores
(to be used with Synapter instances) for
individual files.
Usage
1
inspectPeptideScores(filename)
Arguments
filename
The name of a final peptide file.
Value
A table of peptide counts in each peptide matchType *
protein dataBasteType category. Also plots the distribution of
respective peptide scores.
Author(s)
Laurent Gatto
synapter documentation built on Nov. 8, 2020, 6:25 p.m.
R Package Documentation
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Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Usage Arguments Value Author(s)
View source: R/exported_tools.R
Description
This function takes a final peptide file and
returns information about the unique peptide scores
and their number in each peptide matchType (PepFrag1 and
PepFrag2) by protein dataBaseType (Random and Regular)
category. The function is a lightweight verion of
getPepNumbers and plotPepScores
(to be used with Synapter instances) for
individual files.
Usage
1 | inspectPeptideScores(filename)
|
Arguments
filename |
The name of a final peptide file. |
Value
A table of peptide counts in each peptide matchType * protein dataBasteType category. Also plots the distribution of respective peptide scores.
Author(s)
Laurent Gatto
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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