hammer: ExpressionSet results from Hammer et al 2010
In subSeq: Subsampling of high-throughput sequencing count data
Description
An ExpressionSet containing the results of the Hammer et al 2010 RNA-Seq
study on the nervous system of rats (Hammer et al 2010). This dataset is used in the
examples and vignette for the subSeq package.
This was downloaded from the ReCount database of analysis-ready RNA-Seq datasets (Frazee et al 2011).
Hammer, P., Banck, M. S., Amberg, R., Wang, C., Petznick, G., Luo, S., Khrebtukova, I., Schroth, G. P.,
Beyerlein, P., and Beutler, A. S. (2010). mRNA-seq with agnostic splice site discovery for nervous system
transcriptomics tested in chronic pain. Genome research, 20(6), 847-860.
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2877581/
Frazee, A. C., Langmead, B., and Leek, J. T. (2011). ReCount: a multi-experiment resource of analysis-ready
RNA-seq gene count datasets. BMC Bioinformatics, 12, 449.
http://bowtie-bio.sourceforge.net/recount/
subSeq documentation built on Nov. 8, 2020, 5:45 p.m.
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Description
An ExpressionSet containing the results of the Hammer et al 2010 RNA-Seq study on the nervous system of rats (Hammer et al 2010). This dataset is used in the examples and vignette for the subSeq package.
This was downloaded from the ReCount database of analysis-ready RNA-Seq datasets (Frazee et al 2011).
Hammer, P., Banck, M. S., Amberg, R., Wang, C., Petznick, G., Luo, S., Khrebtukova, I., Schroth, G. P., Beyerlein, P., and Beutler, A. S. (2010). mRNA-seq with agnostic splice site discovery for nervous system transcriptomics tested in chronic pain. Genome research, 20(6), 847-860. http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2877581/
Frazee, A. C., Langmead, B., and Leek, J. T. (2011). ReCount: a multi-experiment resource of analysis-ready RNA-seq gene count datasets. BMC Bioinformatics, 12, 449. http://bowtie-bio.sourceforge.net/recount/
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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