tcga_expr_df: Gene Expression Values for PDAC Cancer Cell Lines exposed to...

In ssPATHS: ssPATHS: Single Sample PATHway Score

Description

A data frame with columns:

tcga_id

String. TCGA aliquot barcode

study

String. TCGA study abbreviation

is_normal

Boolean. TRUE if sample is adjacent normal, FALSE if tumor.

libsize_75percent

Float. Library size as estimated by the 75th quartile.

ENSG00000070831

String. Library size normalized gene expression value for this gene.

Usage

data(tcga_expr_df)

Format

An object of class data.frame with 9461 rows and 54 columns.

Source

This data is generated by the TCGA Research Network: https://www.cancer.gov/tcga and downloaded from the NCI Genomic Data Commons.

Examples

## Not run: 
 tcga_expr_df

## End(Not run)

ssPATHS documentation built on Nov. 8, 2020, 8:03 p.m.