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Ribo-Seq (also named ribosome profiling or footprinting) measures translatome (unlike RNA-Seq, which sequences the transcriptome) by direct quantification of the ribosome-protected fragments (RPFs). This package provides the tools for quality assessment of ribosome profiling. In addition, it can preprocess Ribo-Seq data for subsequent differential analysis.
Package details |
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Author | Jianhong Ou [aut, cre] (<https://orcid.org/0000-0002-8652-2488>), Mariah Hoye [aut] |
Bioconductor views | Coverage GeneRegulation QualityControl RiboSeq Sequencing Visualization |
Maintainer | Jianhong Ou <jianhong.ou@duke.edu> |
License | GPL (>=3) + file LICENSE |
Version | 1.2.1 |
Package repository | View on Bioconductor |
Installation |
Install the latest version of this package by entering the following in R:
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