arrowhead_gm12878_5kb: Domain data from ARROWHEAD TAD-caller for GM12878 at 5 kb
In preciseTAD: preciseTAD: A machine learning framework for precise TAD boundary prediction
Description
Usage
Format
Value
Source
Description
A data frame with 3 columns and 8409 rows
- V1
The chromosome number
- V2
The start coordinate of the TAD
- V3
The end coordinate of the TAD
Usage
1
Format
An object of class data.frame with 8409 rows and 3 columns.
Value
A data.frame
Source
Data from Rao SS, Huntley MH, Durand NC, Stamenova EK et al.
A 3D map of the human genome at kilobase resolution reveals principles
of chromatin looping. Cell 2014 Dec 18;159(7):1665-80. PMID: 25497547.
Available at
https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE63525
preciseTAD documentation built on Nov. 8, 2020, 6:51 p.m.
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Description Usage Format Value Source
Description
A data frame with 3 columns and 8409 rows
- V1
The chromosome number
- V2
The start coordinate of the TAD
- V3
The end coordinate of the TAD
Usage
1 |
Format
An object of class data.frame with 8409 rows and 3 columns.
Value
A data.frame
Source
Data from Rao SS, Huntley MH, Durand NC, Stamenova EK et al. A 3D map of the human genome at kilobase resolution reveals principles of chromatin looping. Cell 2014 Dec 18;159(7):1665-80. PMID: 25497547. Available at https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE63525
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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