dea_evalPlot_curve: dea_evalPlot_curve

In pipeComp: pipeComp pipeline benchmarking framework

Description

dea_evalPlot_curve

Usage

dea_evalPlot_curve(
  res,
  scales = "free",
  agg.by = NULL,
  agg.fn = mean,
  xlim = c(NA, NA),
  colourBy = "method",
  shapeBy = NULL,
  pointsize = 4
)

Arguments

res	Aggregated results of the DEA pipeline
scales	Passed to 'facet_grid'
agg.by	Aggregate results by these columns (default no aggregation)
agg.fn	Function for aggregation (default mean)
xlim	Optional vector of x limits
colourBy	Name of column by which to colour
shapeBy	Name of column determining the shape of the points. If omitted, the shape will indicate whether the nominal FDR is below or equal the real FDR.
pointsize	Size of the points

Value

A ggplot.

Examples

data("exampleDEAresults", package="pipeComp")
dea_evalPlot_curve(exampleDEAresults, agg.by=c("sva.method"))

pipeComp documentation built on Nov. 8, 2020, 7:35 p.m.