A gating method object contains the specifics for generating the gates.
a character
specifying the name of the gating method
a character
vector specifying the dimensions (channels or markers) of the gate
a list
specifying the arguments passed to gating function
a character
or integer
specifying how to group the data.
If character
, group the data by the study variables (columns in pData
).
If integer
, group the data by every N
samples.
a logical
specifying wether to collapse the data within group before gating.
it is only valid when groupBy
is specified
1 2 3 4 5 | ## Not run:
gt <- gatingTemplate(system.file("extdata/gating_template/tcell.csv",package = "openCyto"))
gh_pop_get_gate(gt, '2', '3')
## End(Not run)
|
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