msPurity
Automated Evaluation of Precursor Ion Purity for Mass Spectrometry Based Fragmentation in Metabolomics

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getP-purityD-method: Get peaklist for a purityD object

getP-purityD-method: Get peaklist for a purityD object
In msPurity: Automated Evaluation of Precursor Ion Purity for Mass Spectrometry Based Fragmentation in Metabolomics

Description Usage Arguments Value Examples

Description

output peak list for a purityD object

Usage

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## S4 method for signature 'purityD'
getP(x)

Arguments

x

object; purityD object

Value

peaks

Examples

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datapth <- system.file("extdata", "dims", "mzML", package="msPurityData")
inDF <- Getfiles(datapth, pattern=".mzML", check = FALSE, cStrt = FALSE)
ppDIMS <- purityD(fileList=inDF, cores=1, mzML=TRUE)
peaks <- getP(ppDIMS)

msPurity documentation built on Jan. 14, 2021, 2:44 a.m.

Related to getP-purityD-method in msPurity...

msPurity index
LC-MS/MS data processing and spectral matching workflow using msPurity and XCMS msPurity spectral database schema Using msPurity for Precursor Ion Purity Assessments, Data Processing and Metabolite Annotation of Gas-Phase Mass Spectrometry Fragmentation Data

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