Files in motifcounter
R package for analysing TFBSs in DNA sequences

README.md

NEWS

NAMESPACE

DESCRIPTION

.zenodo.json

build/vignette.rds

src/score2d.h

src/simulate.h

src/mdist_register.c

src/simulate.c

src/background.c

src/score1d.c

src/sequence.c

src/scorefunctions.h

src/combinatorial.h

src/scorefunctions.c

src/combinatorial.c

src/Rminmaxscore.c

src/Rcombinatorial.c

src/sequence.h

src/matrix.h

src/minmaxscore.h

src/markovchain.h

src/Makevars

src/overlap.c

src/matrix.c

src/markovchain_single.c

src/Rbackground.c

src/score1d.h

src/background.h

src/compoundpoisson.h

src/markovchain.c

src/Roption.h

src/Roption.c

src/minmaxscore.c

src/overlap.h

src/Rsimulate.c

src/Roverlap.c

src/score2d.c

src/compoundpoisson.c

src/Rsequence.c

src/Rscore1d.c

src/Rcompoundpoisson.c

R/score_wrapper.R R/observed_wrapper.R R/background_wrapper.R R/combinatorial_wrapper.R R/option.R R/comppoiss_wrapper.R R/overlap.R R/forground_wrapper.R R/simulate_wrapper.R R/count_wrapper.R R/motifcounter-package.R R/markovmodel.R R/wrapper.R R/enrichmentTest.R man-roxygen/templates.R vignettes/motifcounter.Rmd

vignettes/literature.bib

vignettes/motifcounter.css

inst/CITATION

inst/doc/motifcounter.Rmd

inst/doc/motifcounter.html

inst/doc/motifcounter.R

inst/extdata/seq.fasta

inst/extdata/seq2.fasta

inst/extdata/test.tab

inst/extdata/x21.tab

inst/extdata/m2.tab

inst/extdata/test.fa

inst/extdata/x8.tab

inst/extdata/oct4_chipseq.fa

inst/extdata/x1.tab

inst/extdata/m1.tab

inst/extdata/x3.tab

inst/extdata/seq1.fasta

inst/extdata/x31.tab

inst/extdata/test2.fa

inst/extdata/x32.tab

inst/extdata/m12.tab

motifcounter documentation built on Nov. 8, 2020, 5:44 p.m.

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motifcounter
R package for analysing TFBSs in DNA sequences

Files in motifcounter
R package for analysing TFBSs in DNA sequences

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motifcounter R package for analysing TFBSs in DNA sequences

Files in motifcounter R package for analysing TFBSs in DNA sequences

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motifcounter
R package for analysing TFBSs in DNA sequences

Files in motifcounter
R package for analysing TFBSs in DNA sequences