spike_df: Spike-in transcripts data.
In monocle: Clustering, differential expression, and trajectory analysis for single- cell RNA-Seq
Description
A dataset containing the information for the 92 ERCC spikein transcripts (This dataset is based on the data from the
Nature paper from Stephen Quake group)
Usage
1
Format
A data frame with 92 rows and 9 variables:
- ERCC_ID
ID for ERCC transcripts
- subgroup
Subgroup for ERCC transcript
- conc_attomoles_ul_Mix1
Contration of Mix 1 (attomoles / ul)
- conc_attomoles_ul_Mix2
Contration of Mix 2 (attomoles / ul)
- exp_fch_ratio
expected fold change between mix 1 over mix 2
- numMolecules
number of molecules calculated from concentration and volume
- rounded_numMolecules
number in rounded digit of molecules calculated from concentration and volume
monocle documentation built on Nov. 8, 2020, 5:06 p.m.
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Description
A dataset containing the information for the 92 ERCC spikein transcripts (This dataset is based on the data from the Nature paper from Stephen Quake group)
Usage
1 |
Format
A data frame with 92 rows and 9 variables:
- ERCC_ID
ID for ERCC transcripts
- subgroup
Subgroup for ERCC transcript
- conc_attomoles_ul_Mix1
Contration of Mix 1 (attomoles / ul)
- conc_attomoles_ul_Mix2
Contration of Mix 2 (attomoles / ul)
- exp_fch_ratio
expected fold change between mix 1 over mix 2
- numMolecules
number of molecules calculated from concentration and volume
- rounded_numMolecules
number in rounded digit of molecules calculated from concentration and volume
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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