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README.md
In meshes: MeSH Enrichment and Semantic analyses
meshes: MeSH Enrichment and Semantic analyses
MeSH (Medical Subject Headings) is the NLM controlled vocabulary used to
manually index articles for MEDLINE/PubMed. MeSH terms were associated
by Entrez Gene ID by three methods, gendoo, gene2pubmed and RBBH. This
association is fundamental for enrichment and semantic analyses. meshes
supports enrichment analysis (over-representation and gene set
enrichment analysis) of gene list or whole expression profile. The
semantic comparisons of MeSH terms provide quantitative ways to compute
similarities between genes and gene groups. meshes implemented five
methods proposed by Resnik, Schlicker, Jiang, Lin and Wang respectively
and supports more than 70 species.
For details, please visit
https://yulab-smu.github.io/clusterProfiler-book/.
:writing_hand: Authors
Guangchuang YU
School of Basic Medical Sciences, Southern Medical University
https://guangchuangyu.github.io
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meshes documentation built on Nov. 8, 2020, 4:58 p.m.
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meshes: MeSH Enrichment and Semantic analyses
MeSH (Medical Subject Headings) is the NLM controlled vocabulary used to manually index articles for MEDLINE/PubMed. MeSH terms were associated by Entrez Gene ID by three methods, gendoo, gene2pubmed and RBBH. This association is fundamental for enrichment and semantic analyses. meshes supports enrichment analysis (over-representation and gene set enrichment analysis) of gene list or whole expression profile. The semantic comparisons of MeSH terms provide quantitative ways to compute similarities between genes and gene groups. meshes implemented five methods proposed by Resnik, Schlicker, Jiang, Lin and Wang respectively and supports more than 70 species.
For details, please visit https://yulab-smu.github.io/clusterProfiler-book/.
:writing_hand: Authors
Guangchuang YU
School of Basic Medical Sciences, Southern Medical University
https://guangchuangyu.github.io
Try the meshes package in your browser
Any scripts or data that you put into this service are public.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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