Heatmap: Function to create a heatmap object

In heatmaps: Flexible Heatmaps for Functional Genomics and Sequence Features

Description

Function to create a heatmap object

Usage

Heatmap(image, coords = NULL, label = "", nseq = NULL, scale = NULL,
  metadata = list())

Arguments

image	A numeric Matrix
coords	A length-2 integer vector
label	A character vector
nseq	An integer
scale	A length-2 vector
metadata	A list containing arbitrary metadata Using this function avoids calling 'new' directly or manually setting coords and nseq to integers. Other constructors exist for creating heatmaps from data, rather than a raw matrix.

Value

A Heatmap object

See Also

PatternHeatmap CoverageHeatmap PWMScanHeatmap

Examples

data(HeatmapExamples)
hm = Heatmap(mat, coords=c(-100, 100), label="Test")

heatmaps documentation built on Nov. 8, 2020, 7:32 p.m.