intergenic: Extract intergenic regions from processed GenBank annotations
In genbankr: Parsing GenBank files into semantically useful objects
Description
Usage
Arguments
Value
Examples
Description
Extract the intergenic regions from a set of GenBank annotations.
Usage
1
2
## S4 method for signature 'GenBankRecord'
intergenic(x)
Arguments
x
A GenBankRecord object
Value
A GRanges for the intergenic regions, defined as regions not
overlapping any genes defined in the annotations on either strand.
Examples
1
2
gb = readGenBank(system.file("sample.gbk", package="genbankr"))
intergenic(gb)
genbankr documentation built on Nov. 8, 2020, 7:44 p.m.
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Description Usage Arguments Value Examples
Description
Extract the intergenic regions from a set of GenBank annotations.
Usage
1 2 | ## S4 method for signature 'GenBankRecord'
intergenic(x)
|
Arguments
x |
A GenBankRecord object |
Value
A GRanges for the intergenic regions, defined as regions not overlapping any genes defined in the annotations on either strand.
Examples
1 2 | gb = readGenBank(system.file("sample.gbk", package="genbankr"))
intergenic(gb)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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